>>> python-numpy 1.16.2 Extracting gzip -d -c /accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/dl/python-numpy/numpy-1.16.2.tar.gz | tar --strip-components=1 -C /accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/build/python-numpy-1.16.2 -xf - >>> python-numpy 1.16.2 Patching Applying 0001-Don-t-use-fenv.h-on-uClibc.patch using patch: patching file numpy/core/src/npymath/ieee754.c.src Applying 0002-FIX-no-FPU-exceptions-bits-on-ARC-glibc.patch using patch: patching file numpy/core/src/npymath/ieee754.c.src >>> python-numpy 1.16.2 Configuring rm -f /accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/build/python-numpy-1.16.2/site.cfg echo "[DEFAULT]" >> /accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/build/python-numpy-1.16.2/site.cfg echo "library_dirs = /accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/aarch64-buildroot-linux-gnu/sysroot/usr/lib" >> /accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/build/python-numpy-1.16.2/site.cfg echo "include_dirs = /accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/aarch64-buildroot-linux-gnu/sysroot/usr/include" >> /accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/build/python-numpy-1.16.2/site.cfg echo "libraries =" blas,lapack >> /accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/build/python-numpy-1.16.2/site.cfg >>> python-numpy 1.16.2 Building (cd /accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/build/python-numpy-1.16.2//; _PYTHON_SYSCONFIGDATA_NAME="_sysconfigdata_m_linux_aarch64-linux-gnu" PATH="/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/bin:/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/sbin:/usr/bin:/bin" PYTHONPATH="/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/target/usr/lib/python3.7/" PYTHONNOUSERSITE=1 _python_sysroot=/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/aarch64-buildroot-linux-gnu/sysroot _python_prefix=/usr _python_exec_prefix=/usr /accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/bin/python setup.py build --fcompiler=None) blas_opt_info: blas_mkl_info: customize UnixCCompiler libraries mkl_rt not found in ['/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/aarch64-buildroot-linux-gnu/sysroot/usr/lib'] NOT AVAILABLE blis_info: customize UnixCCompiler customize UnixCCompiler customize UnixCCompiler FOUND: libraries = ['blas', 'lapack', 'blas', 'lapack'] library_dirs = ['/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/aarch64-buildroot-linux-gnu/sysroot/usr/lib'] define_macros = [('HAVE_CBLAS', None)] include_dirs = ['/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/aarch64-buildroot-linux-gnu/sysroot/usr/include'] language = c customize UnixCCompiler customize UnixCCompiler FOUND: libraries = ['blas', 'lapack', 'blas', 'lapack', 'blas', 'lapack'] library_dirs = ['/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/aarch64-buildroot-linux-gnu/sysroot/usr/lib'] define_macros = [('HAVE_CBLAS', None)] include_dirs = ['/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/aarch64-buildroot-linux-gnu/sysroot/usr/include'] language = c lapack_opt_info: lapack_mkl_info: customize UnixCCompiler libraries mkl_rt not found in ['/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/aarch64-buildroot-linux-gnu/sysroot/usr/lib'] NOT AVAILABLE openblas_lapack_info: customize UnixCCompiler customize UnixCCompiler customize UnixCCompiler C compiler: /accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/bin/aarch64-linux-gnu-gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Os -g2 -fPIC creating /tmp/tmpt1fgmmij/tmp creating /tmp/tmpt1fgmmij/tmp/tmpt1fgmmij compile options: '-c' aarch64-linux-gnu-gcc: /tmp/tmpt1fgmmij/source.c /accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/bin/aarch64-linux-gnu-gcc /tmp/tmpt1fgmmij/tmp/tmpt1fgmmij/source.o -L/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/aarch64-buildroot-linux-gnu/sysroot/usr/lib -lblas -llapack -o /tmp/tmpt1fgmmij/a.out /tmp/tmpt1fgmmij/tmp/tmpt1fgmmij/source.o: In function `main': /tmp/tmpt1fgmmij/source.c:4: undefined reference to `zungqr_' collect2: error: ld returned 1 exit status NOT AVAILABLE openblas_clapack_info: customize UnixCCompiler customize UnixCCompiler customize UnixCCompiler C compiler: /accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/bin/aarch64-linux-gnu-gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Os -g2 -fPIC creating /tmp/tmpwocsrz_7/tmp creating /tmp/tmpwocsrz_7/tmp/tmpwocsrz_7 compile options: '-c' aarch64-linux-gnu-gcc: /tmp/tmpwocsrz_7/source.c /accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/bin/aarch64-linux-gnu-gcc /tmp/tmpwocsrz_7/tmp/tmpwocsrz_7/source.o -L/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/aarch64-buildroot-linux-gnu/sysroot/usr/lib -lblas -llapack -o /tmp/tmpwocsrz_7/a.out /tmp/tmpwocsrz_7/tmp/tmpwocsrz_7/source.o: In function `main': /tmp/tmpwocsrz_7/source.c:4: undefined reference to `zungqr_' collect2: error: ld returned 1 exit status NOT AVAILABLE atlas_3_10_threads_info: Setting PTATLAS=ATLAS customize UnixCCompiler libraries lapack_atlas not found in /accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/aarch64-buildroot-linux-gnu/sysroot/usr/lib customize UnixCCompiler libraries tatlas,tatlas not found in /accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/aarch64-buildroot-linux-gnu/sysroot/usr/lib NOT AVAILABLE atlas_3_10_info: customize UnixCCompiler libraries lapack_atlas not found in /accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/aarch64-buildroot-linux-gnu/sysroot/usr/lib customize UnixCCompiler libraries satlas,satlas not found in /accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/aarch64-buildroot-linux-gnu/sysroot/usr/lib NOT AVAILABLE atlas_threads_info: Setting PTATLAS=ATLAS customize UnixCCompiler libraries lapack_atlas not found in /accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/aarch64-buildroot-linux-gnu/sysroot/usr/lib customize UnixCCompiler libraries ptf77blas,ptcblas,atlas not found in /accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/aarch64-buildroot-linux-gnu/sysroot/usr/lib NOT AVAILABLE atlas_info: customize UnixCCompiler libraries lapack_atlas not found in /accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/aarch64-buildroot-linux-gnu/sysroot/usr/lib customize UnixCCompiler libraries f77blas,cblas,atlas not found in /accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/aarch64-buildroot-linux-gnu/sysroot/usr/lib NOT AVAILABLE accelerate_info: NOT AVAILABLE lapack_info: customize UnixCCompiler customize UnixCCompiler customize UnixCCompiler FOUND: libraries = ['lapack', 'blas', 'lapack'] library_dirs = ['/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/aarch64-buildroot-linux-gnu/sysroot/usr/lib'] language = f77 blas_info: customize UnixCCompiler customize UnixCCompiler C compiler: /accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/bin/aarch64-linux-gnu-gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Os -g2 -fPIC creating /tmp/tmpobl9ijr2/tmp creating /tmp/tmpobl9ijr2/tmp/tmpobl9ijr2 compile options: '-I/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/aarch64-buildroot-linux-gnu/sysroot/usr/include -c' aarch64-linux-gnu-gcc: /tmp/tmpobl9ijr2/source.c /accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/bin/aarch64-linux-gnu-gcc /tmp/tmpobl9ijr2/tmp/tmpobl9ijr2/source.o -L/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/aarch64-buildroot-linux-gnu/sysroot/usr/lib -lcblas -o /tmp/tmpobl9ijr2/a.out /accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/aarch64-buildroot-linux-gnu/sysroot/usr/lib/libcblas.so: undefined reference to `scnrm2_' /accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/aarch64-buildroot-linux-gnu/sysroot/usr/lib/libcblas.so: undefined reference to `scasum_' collect2: error: ld returned 1 exit status /accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/bin/aarch64-linux-gnu-gcc /tmp/tmpobl9ijr2/tmp/tmpobl9ijr2/source.o -L/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/aarch64-buildroot-linux-gnu/sysroot/usr/lib -lblas -o /tmp/tmpobl9ijr2/a.out /tmp/tmpobl9ijr2/tmp/tmpobl9ijr2/source.o: In function `main': /tmp/tmpobl9ijr2/source.c:6: undefined reference to `cblas_ddot' collect2: error: ld returned 1 exit status Running from numpy source directory. /accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/build/python-numpy-1.16.2/numpy/distutils/system_info.py:638: UserWarning: Atlas (http://math-atlas.sourceforge.net/) libraries not found. Directories to search for the libraries can be specified in the numpy/distutils/site.cfg file (section [atlas]) or by setting the ATLAS environment variable. self.calc_info() Traceback (most recent call last): File "/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/target/usr/lib/python3.7/distutils/unixccompiler.py", line 196, in link self.spawn(linker + ld_args) File "/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/build/python-numpy-1.16.2/numpy/distutils/ccompiler.py", line 92, in m = lambda self, *args, **kw: func(self, *args, **kw) File "/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/build/python-numpy-1.16.2/numpy/distutils/ccompiler.py", line 172, in CCompiler_spawn (cmd, s, msg)) distutils.errors.DistutilsExecError: Command "/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/bin/aarch64-linux-gnu-gcc /tmp/tmpobl9ijr2/tmp/tmpobl9ijr2/source.o -L/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/aarch64-buildroot-linux-gnu/sysroot/usr/lib -lcblas -o /tmp/tmpobl9ijr2/a.out" failed with exit status 1 During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/build/python-numpy-1.16.2/numpy/distutils/system_info.py", line 1736, in has_cblas extra_postargs=info.get('extra_link_args', [])) File "/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/target/usr/lib/python3.7/distutils/ccompiler.py", line 734, in link_executable debug, extra_preargs, extra_postargs, None, target_lang) File "/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/target/usr/lib/python3.7/distutils/unixccompiler.py", line 198, in link raise LinkError(msg) distutils.errors.LinkError: Command "/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/bin/aarch64-linux-gnu-gcc /tmp/tmpobl9ijr2/tmp/tmpobl9ijr2/source.o -L/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/aarch64-buildroot-linux-gnu/sysroot/usr/lib -lcblas -o /tmp/tmpobl9ijr2/a.out" failed with exit status 1 During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/target/usr/lib/python3.7/distutils/unixccompiler.py", line 196, in link self.spawn(linker + ld_args) File "/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/build/python-numpy-1.16.2/numpy/distutils/ccompiler.py", line 92, in m = lambda self, *args, **kw: func(self, *args, **kw) File "/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/build/python-numpy-1.16.2/numpy/distutils/ccompiler.py", line 172, in CCompiler_spawn (cmd, s, msg)) distutils.errors.DistutilsExecError: Command "/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/bin/aarch64-linux-gnu-gcc /tmp/tmpobl9ijr2/tmp/tmpobl9ijr2/source.o -L/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/aarch64-buildroot-linux-gnu/sysroot/usr/lib -lblas -o /tmp/tmpobl9ijr2/a.out" failed with exit status 1 During handling of the above exception, another exception occurred: Traceback (most recent call last): File "setup.py", line 415, in setup_package() File "setup.py", line 407, in setup_package setup(**metadata) File "/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/build/python-numpy-1.16.2/numpy/distutils/core.py", line 137, in setup config = configuration() File "setup.py", line 164, in configuration config.add_subpackage('numpy') File "/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/build/python-numpy-1.16.2/numpy/distutils/misc_util.py", line 1036, in add_subpackage caller_level = 2) File "/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/build/python-numpy-1.16.2/numpy/distutils/misc_util.py", line 1005, in get_subpackage caller_level = caller_level + 1) File "/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/build/python-numpy-1.16.2/numpy/distutils/misc_util.py", line 942, in _get_configuration_from_setup_py config = setup_module.configuration(*args) File "numpy/setup.py", line 16, in configuration config.add_subpackage('linalg') File "/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/build/python-numpy-1.16.2/numpy/distutils/misc_util.py", line 1036, in add_subpackage caller_level = 2) File "/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/build/python-numpy-1.16.2/numpy/distutils/misc_util.py", line 1005, in get_subpackage caller_level = caller_level + 1) File "/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/build/python-numpy-1.16.2/numpy/distutils/misc_util.py", line 942, in _get_configuration_from_setup_py config = setup_module.configuration(*args) File "numpy/linalg/setup.py", line 29, in configuration lapack_info = get_info('lapack_opt', 0) # and {} File "/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/build/python-numpy-1.16.2/numpy/distutils/system_info.py", line 445, in get_info return cl().get_info(notfound_action) File "/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/build/python-numpy-1.16.2/numpy/distutils/system_info.py", line 638, in get_info self.calc_info() File "/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/build/python-numpy-1.16.2/numpy/distutils/system_info.py", line 1604, in calc_info blas_info = get_info('blas') File "/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/build/python-numpy-1.16.2/numpy/distutils/system_info.py", line 445, in get_info return cl().get_info(notfound_action) File "/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/build/python-numpy-1.16.2/numpy/distutils/system_info.py", line 638, in get_info self.calc_info() File "/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/build/python-numpy-1.16.2/numpy/distutils/system_info.py", line 1699, in calc_info lib = self.has_cblas(info) File "/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/build/python-numpy-1.16.2/numpy/distutils/system_info.py", line 1742, in has_cblas extra_postargs=info.get('extra_link_args', [])) File "/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/target/usr/lib/python3.7/distutils/ccompiler.py", line 734, in link_executable debug, extra_preargs, extra_postargs, None, target_lang) File "/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/target/usr/lib/python3.7/distutils/unixccompiler.py", line 198, in link raise LinkError(msg) distutils.errors.LinkError: Command "/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/bin/aarch64-linux-gnu-gcc /tmp/tmpobl9ijr2/tmp/tmpobl9ijr2/source.o -L/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/host/aarch64-buildroot-linux-gnu/sysroot/usr/lib -lblas -o /tmp/tmpobl9ijr2/a.out" failed with exit status 1 package/pkg-generic.mk:238: recipe for target '/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/build/python-numpy-1.16.2/.stamp_built' failed make: *** [/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/output/build/python-numpy-1.16.2/.stamp_built] Error 1 make: Leaving directory '/accts/mlweber1/rclinux/rc-buildroot-test/scripts/instance-0/buildroot'