>>> openmpi 4.0.0 Extracting
bzcat /tmp/instance-5/dl/openmpi/openmpi-4.0.0.tar.bz2 | tar --strip-components=1 -C /tmp/instance-5/output-1/build/openmpi-4.0.0   -xf -
>>> openmpi 4.0.0 Patching
cp package/openmpi/openmpi-mips32-fortran.cache /tmp/instance-5/output-1/build/openmpi-4.0.0/openmpi-config.cache
>>> openmpi 4.0.0 Updating config.sub and config.guess
for file in config.guess config.sub; do for i in $(find /tmp/instance-5/output-1/build/openmpi-4.0.0 -name $file); do cp support/gnuconfig/$file $i; done; done
>>> openmpi 4.0.0 Patching libtool
patching file /tmp/instance-5/output-1/build/openmpi-4.0.0/config/ltmain.sh
Hunk #1 succeeded at 2694 (offset 7 lines).
Hunk #2 succeeded at 4284 (offset 7 lines).
Hunk #3 succeeded at 6579 (offset 25 lines).
Hunk #4 succeeded at 6589 (offset 25 lines).
Hunk #5 succeeded at 6882 (offset 25 lines).
Hunk #6 succeeded at 7174 (offset 25 lines).
Hunk #7 succeeded at 8146 (offset 34 lines).
Hunk #8 succeeded at 10775 (offset 65 lines).
patching file /tmp/instance-5/output-1/build/openmpi-4.0.0/ompi/mca/io/romio321/romio/confdb/ltmain.sh
Hunk #1 succeeded at 2694 (offset 7 lines).
Hunk #2 succeeded at 4284 (offset 7 lines).
Hunk #3 succeeded at 6579 (offset 25 lines).
Hunk #4 succeeded at 6589 (offset 25 lines).
Hunk #5 succeeded at 6882 (offset 25 lines).
Hunk #6 succeeded at 7174 (offset 25 lines).
Hunk #7 succeeded at 8140 (offset 28 lines).
Hunk #8 succeeded at 10769 (offset 59 lines).
patching file /tmp/instance-5/output-1/build/openmpi-4.0.0/opal/mca/event/libevent2022/libevent/ltmain.sh
Hunk #1 succeeded at 2694 (offset 7 lines).
Hunk #2 succeeded at 4284 (offset 7 lines).
Hunk #3 succeeded at 6579 (offset 25 lines).
Hunk #4 succeeded at 6589 (offset 25 lines).
Hunk #5 succeeded at 6882 (offset 25 lines).
Hunk #6 succeeded at 7174 (offset 25 lines).
Hunk #7 succeeded at 8140 (offset 28 lines).
Hunk #8 succeeded at 10769 (offset 59 lines).
patching file /tmp/instance-5/output-1/build/openmpi-4.0.0/opal/mca/pmix/pmix3x/pmix/config/ltmain.sh
Hunk #1 succeeded at 2694 (offset 7 lines).
Hunk #2 succeeded at 4284 (offset 7 lines).
Hunk #3 succeeded at 6579 (offset 25 lines).
Hunk #4 succeeded at 6589 (offset 25 lines).
Hunk #5 succeeded at 6882 (offset 25 lines).
Hunk #6 succeeded at 7174 (offset 25 lines).
Hunk #7 succeeded at 8146 (offset 34 lines).
Hunk #8 succeeded at 10775 (offset 65 lines).
>>> openmpi 4.0.0 Configuring
(cd /tmp/instance-5/output-1/build/openmpi-4.0.0/ && rm -rf config.cache && PATH="/tmp/instance-5/output-1/host/bin:/tmp/instance-5/output-1/host/sbin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/snap/bin" AR="/tmp/instance-5/output-1/host/bin/mipsel-linux-ar" AS="/tmp/instance-5/output-1/host/bin/mipsel-linux-as" LD="/tmp/instance-5/output-1/host/bin/mipsel-linux-ld" NM="/tmp/instance-5/output-1/host/bin/mipsel-linux-nm" CC="/tmp/instance-5/output-1/host/bin/mipsel-linux-gcc" GCC="/tmp/instance-5/output-1/host/bin/mipsel-linux-gcc" CPP="/tmp/instance-5/output-1/host/bin/mipsel-linux-cpp" CXX="/tmp/instance-5/output-1/host/bin/mipsel-linux-g++" FC="/tmp/instance-5/output-1/host/bin/mipsel-linux-gfortran" F77="/tmp/instance-5/output-1/host/bin/mipsel-linux-gfortran" RANLIB="/tmp/instance-5/output-1/host/bin/mipsel-linux-ranlib" READELF="/tmp/instance-5/output-1/host/bin/mipsel-linux-readelf" STRIP="/tmp/instance-5/output-1/host/bin/mipsel-linux-strip" OBJCOPY="/tmp/instance-5/output-1/host/bin/mipsel-linux-objcopy" OBJDUMP="/tmp/instance-5/output-1/host/bin/mipsel-linux-objdump" AR_FOR_BUILD="/usr/bin/ar" AS_FOR_BUILD="/usr/bin/as" CC_FOR_BUILD="/usr/bin/gcc" GCC_FOR_BUILD="/usr/bin/gcc" CXX_FOR_BUILD="/usr/bin/g++" LD_FOR_BUILD="/usr/bin/ld" CPPFLAGS_FOR_BUILD="-I/tmp/instance-5/output-1/host/include" CFLAGS_FOR_BUILD="-O2 -I/tmp/instance-5/output-1/host/include" CXXFLAGS_FOR_BUILD="-O2 -I/tmp/instance-5/output-1/host/include" LDFLAGS_FOR_BUILD="-L/tmp/instance-5/output-1/host/lib -Wl,-rpath,/tmp/instance-5/output-1/host/lib" FCFLAGS_FOR_BUILD="" DEFAULT_ASSEMBLER="/tmp/instance-5/output-1/host/bin/mipsel-linux-as" DEFAULT_LINKER="/tmp/instance-5/output-1/host/bin/mipsel-linux-ld" CPPFLAGS="-D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64" CFLAGS="-D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64  -Os -g0 -D_FORTIFY_SOURCE=1" CXXFLAGS="-D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64  -Os -g0 -D_FORTIFY_SOURCE=1" LDFLAGS="" FCFLAGS=" -Os -g0" FFLAGS=" -Os -g0" PKG_CONFIG="/tmp/instance-5/output-1/host/bin/pkg-config" STAGING_DIR="/tmp/instance-5/output-1/host/mipsel-buildroot-linux-gnu/sysroot" INTLTOOL_PERL=/usr/bin/perl ac_cv_lbl_unaligned_fail=yes ac_cv_func_mmap_fixed_mapped=yes ac_cv_func_memcmp_working=yes ac_cv_have_decl_malloc=yes gl_cv_func_malloc_0_nonnull=yes ac_cv_func_malloc_0_nonnull=yes ac_cv_func_calloc_0_nonnull=yes ac_cv_func_realloc_0_nonnull=yes lt_cv_sys_lib_search_path_spec="" ac_cv_c_bigendian=no  CFLAGS="-D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64  -Os -g0 -D_FORTIFY_SOURCE=1" CONFIG_SITE=/dev/null ./configure --target=mipsel-buildroot-linux-gnu --host=mipsel-buildroot-linux-gnu --build=x86_64-pc-linux-gnu --prefix=/usr --exec-prefix=/usr --sysconfdir=/etc --localstatedir=/var --program-prefix="" --disable-gtk-doc --disable-gtk-doc-html --disable-doc --disable-docs --disable-documentation --with-xmlto=no --with-fop=no --disable-dependency-tracking --enable-ipv6 --disable-nls --disable-static --enable-shared  --enable-mpi-fortran=yes --cache-file=/tmp/instance-5/output-1/build/openmpi-4.0.0/openmpi-config.cache )
configure: WARNING: unrecognized options: --disable-gtk-doc, --disable-gtk-doc-html, --disable-doc, --disable-docs, --disable-documentation, --with-xmlto, --with-fop, --disable-nls
configure: loading cache /tmp/instance-5/output-1/build/openmpi-4.0.0/openmpi-config.cache
checking for perl... /usr/bin/perl

============================================================================
== Configuring Open MPI
============================================================================

*** Startup tests
checking build system type... x86_64-pc-linux-gnu
checking host system type... mipsel-buildroot-linux-gnu
checking target system type... mipsel-buildroot-linux-gnu
checking for mipsel-buildroot-linux-gnu-gcc... /tmp/instance-5/output-1/host/bin/mipsel-linux-gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... yes
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether /tmp/instance-5/output-1/host/bin/mipsel-linux-gcc accepts -g... yes
checking for /tmp/instance-5/output-1/host/bin/mipsel-linux-gcc option to accept ISO C89... none needed
checking whether /tmp/instance-5/output-1/host/bin/mipsel-linux-gcc understands -c and -o together... yes
checking how to run the C preprocessor... /tmp/instance-5/output-1/host/bin/mipsel-linux-cpp
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking minix/config.h usability... no
checking minix/config.h presence... no
checking for minix/config.h... no
checking whether it is safe to define __EXTENSIONS__... yes
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for mipsel-buildroot-linux-gnu-strip... /tmp/instance-5/output-1/host/bin/mipsel-linux-strip
checking for a thread-safe mkdir -p... /usr/bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking for style of include used by make... GNU
checking whether make supports nested variables... yes
checking whether UID '1000' is supported by ustar format... yes
checking whether GID '1000' is supported by ustar format... yes
checking how to create a ustar tar archive... gnutar
checking dependency style of /tmp/instance-5/output-1/host/bin/mipsel-linux-gcc... none
checking whether make supports nested variables... (cached) yes

*** Checking versions
checking for repo version... v4.0.0
checking Open MPI version... 4.0.0
checking Open MPI release date... Nov 12, 2018
checking Open MPI repository version... v4.0.0
checking for repo version... v4.0.0
checking Open MPI Run-Time Environment version... 4.0.0
checking Open MPI Run-Time Environment release date... Nov 12, 2018
checking Open MPI Run-Time Environment repository version... v4.0.0
checking for repo version... v4.0.0
checking Open SHMEM version... 4.0.0
checking Open SHMEM release date... Nov 12, 2018
checking Open SHMEM repository version... v4.0.0
checking for repo version... v4.0.0
checking Open Portable Access Layer version... 4.0.0
checking Open Portable Access Layer release date... Nov 12, 2018
checking Open Portable Access Layer repository version... v4.0.0
checking for bootstrap Autoconf version... 2.69
checking for bootstrap Automake version... 1.15
checking for boostrap Libtool version... 2.4.6

*** Initialization, setup
configure: builddir: /tmp/instance-5/output-1/build/openmpi-4.0.0
configure: srcdir: /tmp/instance-5/output-1/build/openmpi-4.0.0
installing to directory "/usr"

*** OPAL Configuration options
checking if want to run code coverage... no
checking if want to compile with branch probabilities... no
checking if want to debug memory usage... no
checking if want to profile memory usage... no
checking if want developer-level compiler pickyness... no
checking if want developer-level debugging code... no
checking if want to developer-level timing framework... no
checking if want to install project-internal header files... no
checking if want pretty-print stacktrace... yes
checking if want pty support... yes
checking if want weak symbol support... yes
checking if want dlopen support... yes
checking for default value of mca_base_component_show_load_errors... enabled by default
checking if want heterogeneous support... no
checking if word-sized integers must be word-size aligned... yes
checking if want IPv6 support... yes
checking if want package/brand string... Open MPI autobuild@ns3196004 Distribution
checking if want ident string... 4.0.0
checking if want to use an alternative checksum algo for messages... no
checking maximum length of processor name... 256
checking maximum length of error string... 256
checking maximum length of object name... 64
checking maximum length of info key... 36
checking maximum length of info val... 256
checking maximum length of port name... 1024
checking maximum length of datarep string... 128
checking if want getpwuid support... yes
checking for zlib in... (default search paths)
checking zlib.h usability... yes
checking zlib.h presence... yes
checking for zlib.h... yes
looking for library without search path
checking for library containing deflate... -lz
checking if libz requires libnl v1 or v3... 	not a dynamic executable

checking will zlib support be built... yes
checking __NetBSD__... no
checking __FreeBSD__... no
checking __OpenBSD__... no
checking __DragonFly__... no
checking __386BSD__... no
checking __bsdi__... no
checking __APPLE__... no
checking __linux__... yes
checking __sun__... no
checking __sun... no
checking netdb.h usability... yes
checking netdb.h presence... yes
checking for netdb.h... yes
checking netinet/in.h usability... yes
checking netinet/in.h presence... yes
checking for netinet/in.h... yes
checking netinet/tcp.h usability... yes
checking netinet/tcp.h presence... yes
checking for netinet/tcp.h... yes
checking for struct sockaddr_in... yes
checking if --with-cuda is set... not set (--with-cuda=)
checking whether CU_POINTER_ATTRIBUTE_SYNC_MEMOPS is declared... no
checking whether cuPointerGetAttributes is declared... no
checking if have cuda support... no
checking if user requested internal PMIx support()... no
checking for pmix.h in /usr... not found
checking for pmix.h in /usr/include... not found
checking PMIx version to be used... internal

*** ORTE Configuration options
checking if want orterun "--prefix" behavior to be enabled by default... no

*** OMPI Configuration options
checking if want compile-time warnings inside of mpi.h... yes
checking if want sparse process groups... no
checking if want peruse support... no
checking if want Fortran MPI bindings... yes (default)
checking if want C++ bindings... no
checking if want MPI::SEEK_SET support... yes
checking if want run-time MPI parameter checking... runtime

*** OSHMEM Configuration options
checking if want oshmem... yes
checking if want SGI/Quadrics compatibility mode... yes
checking if want OSHMEM API parameter checking... always
checking for on_exit... yes
checking if want pshmem... yes
checking if want to build OSHMEM fortran bindings... yes
no
checking if want custom libmpi(_FOO) name... mpi
checking if want wrapper compiler rpath support... yes
checking if want wrapper compiler runpath support... yes

============================================================================
== Compiler and preprocessor tests
============================================================================

*** C compiler and preprocessor
checking for mipsel-buildroot-linux-gnu-gcc... (cached) /tmp/instance-5/output-1/host/bin/mipsel-linux-gcc
checking whether we are using the GNU C compiler... (cached) yes
checking whether /tmp/instance-5/output-1/host/bin/mipsel-linux-gcc accepts -g... (cached) yes
checking for /tmp/instance-5/output-1/host/bin/mipsel-linux-gcc option to accept ISO C89... (cached) none needed
checking whether /tmp/instance-5/output-1/host/bin/mipsel-linux-gcc understands -c and -o together... (cached) yes
checking if /tmp/instance-5/output-1/host/bin/mipsel-linux-gcc requires a flag for C11... no
configure: verifying /tmp/instance-5/output-1/host/bin/mipsel-linux-gcc supports C11 without a flag
checking if /tmp/instance-5/output-1/host/bin/mipsel-linux-gcc  supports C11 _Thread_local... yes
checking if /tmp/instance-5/output-1/host/bin/mipsel-linux-gcc  supports C11 atomic variables... yes
checking if /tmp/instance-5/output-1/host/bin/mipsel-linux-gcc  supports C11 _Atomic keyword... yes
checking if /tmp/instance-5/output-1/host/bin/mipsel-linux-gcc  supports C11 _Generic keyword... yes
checking if /tmp/instance-5/output-1/host/bin/mipsel-linux-gcc  supports C11 _Static_assert... yes
configure: no flag required for C11 support
checking if /tmp/instance-5/output-1/host/bin/mipsel-linux-gcc  supports __thread... yes
checking if /tmp/instance-5/output-1/host/bin/mipsel-linux-gcc  supports C11 _Thread_local... yes
checking for the C compiler vendor... gnu
checking for ANSI C header files... (cached) yes
checking if /tmp/instance-5/output-1/host/bin/mipsel-linux-gcc supports -finline-functions... yes
checking if /tmp/instance-5/output-1/host/bin/mipsel-linux-gcc supports -fno-strict-aliasing... yes
configure: WARNING:  -fno-strict-aliasing has been added to CFLAGS
checking if /tmp/instance-5/output-1/host/bin/mipsel-linux-gcc supports __builtin_expect... yes
checking if /tmp/instance-5/output-1/host/bin/mipsel-linux-gcc supports __builtin_prefetch... yes
checking if /tmp/instance-5/output-1/host/bin/mipsel-linux-gcc supports __builtin_clz... yes
checking for C optimization flags... -O3 -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Os -g0 -D_FORTIFY_SOURCE=1 -finline-functions -fno-strict-aliasing
checking for Interix environment... no
checking for C ident string support... #ident
checking for int8_t... yes
checking for uint8_t... yes
checking for int16_t... yes
checking for uint16_t... yes
checking for int32_t... yes
checking for uint32_t... yes
checking for int64_t... yes
checking for uint64_t... yes
checking for int128_t... no
checking for __int128... no
checking for uint128_t... no
checking for long long... yes
checking for __float128... no
checking for long double... yes
checking complex.h usability... yes
checking complex.h presence... yes
checking for complex.h... yes
checking for float _Complex... yes
checking for double _Complex... yes
checking for long double _Complex... yes
checking for intptr_t... yes
checking for uintptr_t... yes
checking for mode_t... yes
checking for ssize_t... yes
checking for ptrdiff_t... yes
checking size of _Bool... 1
checking size of char... 1
checking size of short... 2
checking size of int... 4
checking size of long... 4
checking size of long long... 8
checking size of float... 4
checking size of double... 8
checking size of long double... 8
checking size of float _Complex... 8
checking size of double _Complex... 16
checking size of long double _Complex... 16
checking size of void *... 4
checking size of size_t... 4
checking size of ssize_t... 4
checking size of ptrdiff_t... 4
checking size of wchar_t... 4
checking size of pid_t... 4
checking size of atomic_short... 2
checking size of atomic_int... 4
checking size of atomic_long... 4
checking size of atomic_llong... 8
checking alignment of bool... 1
checking alignment of int8_t... 1
checking alignment of int16_t... 2
checking alignment of int32_t... 4
checking alignment of int64_t... 8
checking alignment of char... 1
checking alignment of short... 2
checking alignment of wchar_t... 4
checking alignment of int... 4
checking alignment of long... 4
checking alignment of long long... 8
checking alignment of float... 4
checking alignment of double... 8
checking alignment of long double... 8
checking alignment of float _Complex... 4
checking alignment of double _Complex... 8
checking alignment of long double _Complex... 8
checking alignment of void *... 4
checking alignment of size_t... 4
checking for weak symbol support... yes
checking for macro weak symbol support... yes
checking for functional offsetof macro... yes

*** C++ compiler and preprocessor
checking whether we are using the GNU C++ compiler... yes
checking whether /tmp/instance-5/output-1/host/bin/mipsel-linux-g++ accepts -g... yes
checking dependency style of /tmp/instance-5/output-1/host/bin/mipsel-linux-g++... none
checking how to run the C++ preprocessor... /tmp/instance-5/output-1/host/bin/mipsel-linux-g++ -E
checking for the C++ compiler vendor... gnu
checking if /tmp/instance-5/output-1/host/bin/mipsel-linux-g++ supports -finline-functions... yes
configure: WARNING:  -finline-functions has been added to CXXFLAGS
checking if C and C++ are link compatible... yes
checking for C++ optimization flags... -O3 -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Os -g0 -D_FORTIFY_SOURCE=1 -finline-functions
checking size of bool... 1
checking alignment of bool... (cached) 1

*** C++ compiler and preprocessor
checking whether we are using the GNU C++ compiler... (cached) yes
checking whether /tmp/instance-5/output-1/host/bin/mipsel-linux-g++ accepts -g... (cached) yes
checking dependency style of /tmp/instance-5/output-1/host/bin/mipsel-linux-g++... (cached) none
checking how to run the C++ preprocessor... /tmp/instance-5/output-1/host/bin/mipsel-linux-g++ -E
checking if C++ compiler works... links (cross compiling)
checking if /tmp/instance-5/output-1/host/bin/mipsel-linux-g++ supports -finline-functions... yes
configure: WARNING:  -finline-functions has been added to CXXFLAGS
checking if C and C++ are link compatible... (cached) yes
checking for C++ optimization flags... -O3 -DNDEBUG -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Os -g0 -D_FORTIFY_SOURCE=1 -finline-functions
checking size of bool... (cached) 1
checking alignment of bool... (cached) 1
checking if able to build the MPI C++ bindings... no
checking if want C++ exception handling... skipped

*** Compiler characteristics
checking for __attribute__... yes
checking for __attribute__(aligned)... yes
checking for __attribute__(always_inline)... yes
checking for __attribute__(cold)... yes
checking for __attribute__(const)... yes
checking for __attribute__(deprecated)... yes
checking for __attribute__(deprecated_argument)... yes
checking for __attribute__(error)... yes
checking for __attribute__(format)... yes
checking for __attribute__(format_funcptr)... yes
checking for __attribute__(hot)... yes
checking for __attribute__(malloc)... yes
checking for __attribute__(may_alias)... yes
checking for __attribute__(no_instrument_function)... yes
checking for __attribute__(noinline)... yes
checking for __attribute__(nonnull)... yes
checking for __attribute__(noreturn)... yes
checking for __attribute__(noreturn_funcptr)... yes
checking for __attribute__(packed)... yes
checking for __attribute__(pure)... yes
checking for __attribute__(sentinel)... yes
checking for __attribute__(unused)... yes
checking for __attribute__(visibility)... yes
checking for __attribute__(warn_unused_result)... yes
checking for __attribute__(weak_alias)... yes
checking for __attribute__(destructor)... yes
checking for __attribute__(optnone)... no
checking for __attribute__(extension)... yes
checking for compiler familyid... 0
checking for compiler familyname... UNKNOWN
checking for compiler version... 0
checking for compiler version_str... UNKNOWN

*** Java MPI bindings
checking if want Java bindings... no

*** OpenSHMEM profiling
checking if pshmem will be enabled... yes (weak symbols supported)

*** Assembler
checking dependency style of /tmp/instance-5/output-1/host/bin/mipsel-linux-gcc... none
checking for BSD- or MS-compatible name lister (nm)... /tmp/instance-5/output-1/host/bin/mipsel-linux-nm
checking the name lister (/tmp/instance-5/output-1/host/bin/mipsel-linux-nm) interface... BSD nm
checking for fgrep... /usr/bin/grep -F
checking for __atomic builtin atomics... no
checking for __atomic_compare_exchange_n... no
checking for __atomic_compare_exchange_n with -mcx16... no
checking for __atomic_compare_exchange_n with -latomic... no
checking for __sync_bool_compare_and_swap... no
checking for __sync_bool_compare_and_swap with -mcx16... no
checking for __sync_bool_compare_and_swap with -latomic... no
checking for __sync builtin atomics... yes
checking for 64-bit __sync builtin atomics... no
checking for __sync_bool_compare_and_swap... no
checking for __sync_bool_compare_and_swap with -mcx16... no
checking for __sync_bool_compare_and_swap with -latomic... no
checking if .proc/endp is needed... no
checking directive for setting text section... .text
checking directive for exporting symbols... .globl
checking for objdump... /tmp/instance-5/output-1/host/bin/mipsel-linux-objdump
checking if .note.GNU-stack is needed... no
checking suffix for labels... :
checking prefix for global symbol labels... 
checking prefix for lsym labels... .L
checking prefix for function in .type... @
checking if .size is needed... yes
checking if .align directive takes logarithmic value... yes
checking for __sync builtin atomics... yes
checking for 64-bit __sync builtin atomics... no
checking for __sync_bool_compare_and_swap... no
checking for __sync_bool_compare_and_swap with -mcx16... no
checking for __sync_bool_compare_and_swap with -latomic... no
checking for assembly architecture... UNSUPPORTED
checking for builtin atomics... BUILTIN_SYNC

*** Fortran compiler
checking for mipsel-buildroot-linux-gnu-gfortran... /tmp/instance-5/output-1/host/bin/mipsel-linux-gfortran
checking whether we are using the GNU Fortran compiler... yes
checking whether /tmp/instance-5/output-1/host/bin/mipsel-linux-gfortran accepts -g... yes
configure: WARNING: Open MPI now ignores the F77 and FFLAGS environment variables; only the FC and FCFLAGS environment variables are used.
checking whether ln -s works... yes
checking if Fortran compiler works... links (cross compiling)
checking for extra arguments to build a shared library... none needed
checking for /tmp/instance-5/output-1/host/bin/mipsel-linux-gfortran warnings flags... none
checking for Fortran flag to compile .f files... none
checking for Fortran flag to compile .f90 files... none
checking to see if Fortran compilers need additional linker flags... none
checking  external symbol convention... single underscore
checking if C and Fortran are link compatible... yes
checking to see if Fortran compiler likes the C++ exception flags... skipped (no C++ exceptions flags)
checking to see if mpifort compiler needs additional linker flags... none
checking if Fortran compiler supports CHARACTER... yes
checking size of Fortran CHARACTER... (cached) 1
checking for C type corresponding to CHARACTER... char
checking alignment of Fortran CHARACTER... (cached) 1
checking for corresponding KIND value of CHARACTER... C_SIGNED_CHAR
checking KIND value of Fortran C_SIGNED_CHAR... (cached) 1
checking if Fortran compiler supports LOGICAL... yes
checking size of Fortran LOGICAL... (cached) 4
checking for C type corresponding to LOGICAL... int
checking alignment of Fortran LOGICAL... (cached) 4
checking for corresponding KIND value of LOGICAL... C_INT
checking KIND value of Fortran C_INT... (cached) 4
checking if Fortran compiler supports LOGICAL*1... yes
checking size of Fortran LOGICAL*1... (cached) 1
checking for C type corresponding to LOGICAL*1... char
checking alignment of Fortran LOGICAL*1... (cached) 1
checking for corresponding KIND value of LOGICAL*1... C_SIGNED_CHAR
checking KIND value of Fortran C_SIGNED_CHAR... (cached) 1
checking if Fortran compiler supports LOGICAL*2... yes
checking size of Fortran LOGICAL*2... (cached) 2
checking for C type corresponding to LOGICAL*2... short
checking alignment of Fortran LOGICAL*2... (cached) 2
checking for corresponding KIND value of LOGICAL*2... C_SHORT
checking KIND value of Fortran C_SHORT... (cached) 2
checking if Fortran compiler supports LOGICAL*4... yes
checking size of Fortran LOGICAL*4... (cached) 4
checking for C type corresponding to LOGICAL*4... int
checking alignment of Fortran LOGICAL*4... (cached) 4
checking for corresponding KIND value of LOGICAL*4... C_INT
checking KIND value of Fortran C_INT... (cached) 4
checking if Fortran compiler supports LOGICAL*8... yes
checking size of Fortran LOGICAL*8... (cached) 8
checking for C type corresponding to LOGICAL*8... long long
checking alignment of Fortran LOGICAL*8... (cached) 8
checking for corresponding KIND value of LOGICAL*8... C_LONG_LONG
checking KIND value of Fortran C_LONG_LONG... (cached) 8
checking if Fortran compiler supports INTEGER... yes
checking size of Fortran INTEGER... (cached) 4
checking for C type corresponding to INTEGER... int
checking alignment of Fortran INTEGER... (cached) 4
checking for corresponding KIND value of INTEGER... C_INT
checking KIND value of Fortran C_INT... (cached) 4
checking if Fortran compiler supports INTEGER*1... yes
checking size of Fortran INTEGER*1... (cached) 1
checking for C type corresponding to INTEGER*1... char
checking alignment of Fortran INTEGER*1... (cached) 1
checking for corresponding KIND value of INTEGER*1... C_SIGNED_CHAR
checking KIND value of Fortran C_SIGNED_CHAR... (cached) 1
checking if Fortran compiler supports INTEGER*2... yes
checking size of Fortran INTEGER*2... (cached) 2
checking for C type corresponding to INTEGER*2... short
checking alignment of Fortran INTEGER*2... (cached) 2
checking for corresponding KIND value of INTEGER*2... C_SHORT
checking KIND value of Fortran C_SHORT... (cached) 2
checking if Fortran compiler supports INTEGER*4... yes
checking size of Fortran INTEGER*4... (cached) 4
checking for C type corresponding to INTEGER*4... int
checking alignment of Fortran INTEGER*4... (cached) 4
checking for corresponding KIND value of INTEGER*4... C_INT
checking KIND value of Fortran C_INT... (cached) 4
checking if Fortran compiler supports INTEGER*8... yes
checking size of Fortran INTEGER*8... (cached) 8
checking for C type corresponding to INTEGER*8... long long
checking alignment of Fortran INTEGER*8... (cached) 8
checking for corresponding KIND value of INTEGER*8... C_LONG_LONG
checking KIND value of Fortran C_LONG_LONG... (cached) 8
checking if Fortran compiler supports INTEGER*16... no
checking if Fortran compiler supports REAL... yes
checking size of Fortran REAL... (cached) 4
checking for C type corresponding to REAL... float
checking alignment of Fortran REAL... (cached) 4
checking for corresponding KIND value of REAL... C_FLOAT
checking KIND value of Fortran C_FLOAT... (cached) 4
checking if Fortran compiler supports REAL*2... no
checking if Fortran compiler supports REAL*4... yes
checking size of Fortran REAL*4... (cached) 4
checking for C type corresponding to REAL*4... float
checking alignment of Fortran REAL*4... (cached) 4
checking for corresponding KIND value of REAL*4... C_FLOAT
checking KIND value of Fortran C_FLOAT... (cached) 4
checking if Fortran compiler supports REAL*8... yes
checking size of Fortran REAL*8... (cached) 8
checking for C type corresponding to REAL*8... double
checking alignment of Fortran REAL*8... (cached) 8
checking for corresponding KIND value of REAL*8... C_DOUBLE
checking KIND value of Fortran C_DOUBLE... (cached) 8
checking if Fortran compiler supports REAL*16... no
checking for C type matching bit representation of REAL*16... skipped (no REAL*16)
configure: WARNING: MPI_REAL16 and MPI_COMPLEX32 support have been disabled
checking if Fortran compiler supports DOUBLE PRECISION... yes
checking size of Fortran DOUBLE PRECISION... (cached) 8
checking for C type corresponding to DOUBLE PRECISION... double
checking alignment of Fortran DOUBLE PRECISION... (cached) 8
checking for corresponding KIND value of DOUBLE PRECISION... C_DOUBLE
checking KIND value of Fortran C_DOUBLE... (cached) 8
checking if Fortran compiler supports COMPLEX... yes
checking size of Fortran COMPLEX... (cached) 8
checking for C type corresponding to COMPLEX... float _Complex
checking alignment of Fortran COMPLEX... (cached) 4
checking for corresponding KIND value of COMPLEX... C_FLOAT_COMPLEX
checking KIND value of Fortran C_FLOAT_COMPLEX... (cached) 4
checking if Fortran compiler supports COMPLEX*4... no
checking if Fortran compiler supports COMPLEX*8... yes
checking size of Fortran COMPLEX*8... (cached) 8
checking for C type corresponding to COMPLEX*8... float _Complex
checking alignment of Fortran COMPLEX*8... (cached) 4
checking for corresponding KIND value of COMPLEX*8... C_FLOAT_COMPLEX
checking KIND value of Fortran C_FLOAT_COMPLEX... (cached) 4
checking if Fortran compiler supports COMPLEX*16... yes
checking size of Fortran COMPLEX*16... (cached) 16
checking for C type corresponding to COMPLEX*16... double _Complex
checking alignment of Fortran COMPLEX*16... (cached) 8
checking for corresponding KIND value of COMPLEX*16... C_DOUBLE_COMPLEX
checking KIND value of Fortran C_DOUBLE_COMPLEX... (cached) 8
checking if Fortran compiler supports COMPLEX*32... no
checking if Fortran compiler supports DOUBLE COMPLEX... yes
checking size of Fortran DOUBLE COMPLEX... (cached) 16
checking for C type corresponding to DOUBLE COMPLEX... double _Complex
checking alignment of Fortran DOUBLE COMPLEX... (cached) 8
checking for corresponding KIND value of DOUBLE COMPLEX... C_DOUBLE_COMPLEX
checking KIND value of Fortran C_DOUBLE_COMPLEX... (cached) 8
checking for max Fortran MPI handle index... 2147483647
checking Fortran value for .TRUE. logical type... (cached) 1
checking for correct handling of Fortran logical arrays... yes
checking max supported Fortran array rank... 15
checking for the value of MPI_STATUS_SIZE... 5 Fortran INTEGERs
checking KIND value of Fortran C_INT16_T... (cached) 2
checking KIND value of Fortran C_INT32_T... (cached) 4
checking KIND value of Fortran C_INT64_T... (cached) 8
checking if building Fortran mpif.h bindings... yes
checking if Fortran compiler supports INTERFACE... yes
checking if Fortran compiler supports ISO_FORTRAN_ENV... yes
checking if Fortran compiler supports STORAGE_SIZE for relevant types... yes
checking for Fortran compiler module include flag... -I
checking Fortran compiler ignore TKR syntax... not cached; checking variants
checking for Fortran compiler support of TYPE(*), DIMENSION(*)... no
checking for Fortran compiler support of !GCC$ ATTRIBUTES NO_ARG_CHECK... yes
checking Fortran compiler ignore TKR syntax... 1:type(*), dimension(*):!GCC$ ATTRIBUTES NO_ARG_CHECK ::
checking if Fortran compiler supports ISO_C_BINDING... yes
checking if building Fortran 'use mpi' bindings... yes
checking if Fortran compiler supports SUBROUTINE BIND(C)... yes
checking if Fortran compiler supports TYPE, BIND(C)... yes
checking if Fortran compiler supports TYPE(type), BIND(C, NAME="name")... yes
checking if Fortran compiler supports PROCEDURE... yes
checking if Fortran compiler supports USE...ONLY... yes
checking if Fortran compiler supports optional arguments... yes
checking if Fortran compiler supports C_FUNLOC/TS 29113... yes
checking if Fortran compiler supports PRIVATE... yes
checking if Fortran compiler supports PROTECTED... yes
checking if Fortran compiler supports ABSTRACT... yes
checking if Fortran compiler supports ASYNCHRONOUS... yes
checking size of Fortran type(test_mpi_handle)... (cached) 4
checking alignment of Fortran type(test_mpi_handle)... configure: error: Can not determine alignment of type(test_mpi_handle) when cross-compiling
make: *** [package/pkg-generic.mk:260: /tmp/instance-5/output-1/build/openmpi-4.0.0/.stamp_configured] Error 1
make: Leaving directory '/tmp/instance-5/buildroot'